Ensembl Squirrel

No.

Interpro name	Number of genes	Number of Ensembl hits	No.	Interpro name	Number of genes	Number of Ensembl hits
1	IPR000694 Proline-rich region	507	4099	21	IPR003598 Immunoglobulin subtype 2	57	621
2	IPR000276 Rhodopsin-like GPCR superfamily	443	6104	22	IPR000742 EGF-like, type 3	53	1163
3	IPR000719 Protein kinase	310	3249	23	IPR001254 Peptidase S1 and S6, chymotrypsin/Hap	53	335
4	IPR003596 Immunoglobulin V-set, subgroup	190	1707	24	IPR001128 Cytochrome P450	52	858
5	IPR001680 WD-40 repeat	166	2092	25	IPR001440 Tetratricopeptide TPR_1	51	841
6	IPR000504 RNA-binding region RNP-1 (RNA recognition motif)	137	825	26	IPR007087 Zinc finger, C2H2-type	51	508
7	IPR001806 Ras GTPase	96	938	27	IPR001478 PDZ/DHR/GLGF	48	380
8	IPR002110 Ankyrin	89	1344	28	IPR000104 Antifreeze protein, type I	47	391
9	IPR000210 BTB	88	1437	29	IPR000198 RhoGAP	45	373
10	IPR000008 C2 calcium-dependent membrane targeting	87	911	30	IPR000315 Zinc finger, B-box	42	585
11	IPR001909 KRAB box	86	2758	31	IPR000884 Thrombospondin, type I	41	704
12	IPR001781 LIM, zinc-binding	82	2725	32	IPR001664 Intermediate filament protein	41	263
13	IPR001841 Zinc finger, RING-type	77	451	33	IPR000219 DH	41	378
14	IPR001611 Leucine-rich repeat	74	751	34	IPR001356 Homeobox	40	265
15	IPR000533 Tropomyosin	68	428	35	IPR002126 Cadherin	40	932
16	IPR002048 Calcium-binding EF-hand	67	428	36	IPR002198 Short-chain dehydrogenase/reductase SDR	39	334
17	IPR007086 Zinc finger, C2H2-subtype	66	1464	37	IPR000215 Proteinase inhibitor I4, serpin	39	187
18	IPR000048 IQ calmodulin-binding region	66	944	38	IPR000886 Endoplasmic reticulum targeting sequence	39	196
19	IPR000047 Helix-turn-helix motif, lambda-like repressor	62	703	39	IPR000108 Neutrophil cytosol factor 2	37	848
20	IPR000152 Aspartic acid and asparagine hydroxylation site	57	3930	40	IPR000571 Zinc finger, CCCH-type	37	215

View top 500 InterPro hits (large table)

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Ensembl release 49 - Mar 2008