Top 40 InterPro Domains in the Ensembl Database

No.

Interpro name	Number of genes	Number of Ensembl hits	No.	Interpro name	Number of genes	Number of Ensembl hits
1	IPR000276 Rhodopsin-like GPCR superfamily	1066	16003	21	IPR000152 Aspartic acid and asparagine hydroxylation site	82	11137
2	IPR000694 Proline-rich region	1021	13245	22	IPR001909 KRAB box	79	3208
3	IPR000719 Protein kinase	324	5665	23	IPR000372 Leucine-rich repeat, cysteine-rich flanking region, N-terminal	72	1867
4	IPR003596 Immunoglobulin V-set, subgroup	309	3547	24	IPR000315 Zinc finger, B-box	70	1567
5	IPR000504 RNA-binding region RNP-1 (RNA recognition motif)	227	2174	25	IPR001092 Basic helix-loop-helix dimerisation region bHLH	69	283
6	IPR000533 Tropomyosin	187	1902	26	IPR000742 EGF-like, type 3	67	2387
7	IPR001680 WD-40 repeat	182	3738	27	IPR002190 MAGE protein	66	144
8	IPR000210 BTB	170	4137	28	IPR001128 Cytochrome P450	66	1938
9	IPR001841 Zinc finger, RING-type	144	1195	29	IPR000108 Neutrophil cytosol factor 2	65	1756
10	IPR001806 Ras GTPase	139	1879	30	IPR000198 RhoGAP	64	727
11	IPR000008 C2 calcium-dependent membrane targeting	135	2763	31	IPR005135 Endonuclease/exonuclease/phosphatase	63	103
12	IPR000047 Helix-turn-helix motif, lambda-like repressor	131	1920	32	IPR000219 DH	63	1150
13	IPR000104 Antifreeze protein, type I	127	1963	33	IPR000357 HEAT	60	464
14	IPR001781 LIM, zinc-binding	121	6173	34	IPR001254 Peptidase S1 and S6, chymotrypsin/Hap	60	549
15	IPR001888 Transposase, type 1	113	130	35	IPR007087 Zinc finger, C2H2-type	59	766
16	IPR002110 Ankyrin	105	2375	36	IPR001304 C-type lectin	56	482
17	IPR001611 Leucine-rich repeat	101	1482	37	IPR000169 Peptidase, cysteine peptidase active site	56	841
18	IPR002048 Calcium-binding EF-hand	97	866	38	IPR000558 Histone H2B	55	415
19	IPR000048 IQ calmodulin-binding region	87	3345	39	IPR001478 PDZ/DHR/GLGF	55	568
20	IPR001440 Tetratricopeptide TPR_1	85	2064	40	IPR003006 Immunoglobulin/major histocompatibility complex	54	601

View top 500 InterPro hits (large table)

Ensembl Cow

Your Archive EnsEMBL

Help & Documentation

Ensembl Archive